Chemical: Drug
tamoxifen
Available Prescribing Info
- Annotation of DPWG Guideline for tamoxifen and CYP2D6
1. Annotation of DPWG Guideline for tamoxifen and CYP2D6
Summary
For CYP2D6 poor and intermediate metabolizers, consider using aromatase inhibitors for postmenopausal women due to increased risk for relapse of breast cancer with tamoxifen. For intermediate metabolizers, avoid concomitant CYP2D6 inhibitor use.
Annotation
The Royal Dutch Pharmacists Association - Pharmacogenetics Working Group has evaluated therapeutic dose recommendations for tamoxifen based on CYP2D6 genotypes [Article:21412232]. For PM and IM genotypes, they recommend considering using aromatase inhibitors for postmenopausal women due to increased risk for relapse of breast cancer with tamoxifen. For IM genotypes, they recommend avoiding concomitant CYP2D6 inhibitor use.
| Phenotype (Genotype) | Therapeutic Dose Recommendation | Level of Evidence | Clinical Relevance |
|---|---|---|---|
| PM (two inactive (*3-*8, *11-*16, *19-*21, *38, *40, *42) alleles) | Increased risk for relapse of breast cancer. Consider aromatase inhibitor for postmenopausal women. | Published controlled studies of good quality* relating to phenotyped and/or genotyped patients or healthy volunteers, and having relevant pharmacokinetic or clinical endpoints. | Clinical effect (S): Failure of lifesaving therapy e.g. anticipated myelosuppression; prevention of breast cancer relapse; arrhythmia; neutropenia < 0.5x109/l; leucopenia < 1.0x109/l; thrombocytopenia < 25x109/l; life-threatening complications from diarrhea. |
| IM (two decreased-activity (*9, *10, *17, *29, *36, *41) alleles or carrying one active (*1, *2, *33, *35) and one inactive (*3-*8, *11-*16, *19-*21, *38, *40, *42) allele, or carrying one decreased-activity (*9, *10, *17, *29, *36, *41) allele and one inactive (*3-*8, *11-*16, *19-*21, *38, *40, *42) allele) | Increased risk for relapse of breast cancer. Avoid concomitant use of CYP2D6 inhibitors. Consider aromatase inhibitor for postmenopausal women. | Published controlled studies of good quality* relating to phenotyped and/or genotyped patients or healthy volunteers, and having relevant pharmacokinetic or clinical endpoints. | Clinical effect (S): Failure of lifesaving therapy e.g. anticipated myelosuppression; prevention of breast cancer relapse; arrhythmia; neutropenia < 0.5x109/l; leucopenia < 1.0x109/l; thrombocytopenia < 25x109/l; life-threatening complications from diarrhea. |
| UM (a gene duplication in absence of inactive (*3-*8, *11-*16, *19-*21, *38, *40, *42) or decreased-activity (*9, *10, *17, *29, *36, *41) alleles) | No. | Published controlled studies of good quality* relating to phenotyped and/or genotyped patients or healthy volunteers, and having relevant pharmacokinetic or clinical endpoints. | Minor clinical effect (S): QTc prolongation (<450 ms female, <470 ms male); INR increase < 4.5. Kinetic effect (S). |
Annotated Labels
- Annotation of FDA Label for tamoxifen and ESR1,ESR2,F2,F5
- Annotation of HCSC Label for tamoxifen and CYP2D6,ESR1,ESR2
1. Annotation of FDA Label for tamoxifen and ESR1,ESR2,F2,F5
Summary
Tamoxifen is an anti-estrogen used in the treatment and prevention of breast neoplasms particularly those with estrogen receptor positive breast cancer.
Annotation
Tamoxifen is an anti-estrogen used in the treatment and prevention of breast neoplasms particularly those with estrogen receptor positive breast cancer.
Excerpts from the tamoxifen (Nolvadex) drug label:
Available evidence indicates that patients whose tumors are estrogen receptor positive are more likely to benefit from NOLVADEX therapy.
The estrogen and progesterone receptor values may help to predict whether adjuvant NOLVADEX therapy is likely to be beneficial. NOLVADEX reduces the occurrence of contralateral breast cancer in patients receiving adjuvant NOLVADEX therapy for breast cancer.
The FDA also highlight factor V Leiden and Prothrombin mutations in their "Table of Pharmacogenomic Biomarkers in Drug Labels", however in the trial mentioned within the drug label there was no benefit of screening for these factors:
When NOLVADEX is coadminstered with chemotherapy, there may be a further increase in the incidence of thromboembolic effects. For treatment of breast cancer, the risks and benefits of NOLVADEX should be carefully considered in women with a history of thromboembolic events. In a subsmall study (N=81) of the NSABP P-1 trial, there appeared to be no benefit to screening women for Factor V Leiden and Prothrombin mutations G20210A as a means to identify those who may not be appropriate candidates for NOLVADEX therapy.
For the complete drug label text with sections containing pharmacogenetic information highlighted, see the tamoxifen drug label.
*Disclaimer: The contents of this page have not been endorsed by the FDA and are the sole responsibility of PharmGKB.
Genes and/or phenotypes found in this label
-
Breast Neoplasms
- Indications & usage section, Contraindications section, Warnings section, Adverse reactions section, Precautions section
- source: PHONT
-
Death
- Warnings section, Adverse reactions section, Precautions section
- source: PHONT
-
Depression
- Adverse reactions section
- source: PHONT
-
Hot Flashes
- Adverse reactions section
- source: PHONT
-
Neoplasms
- Indications & usage section, Contraindications section, Warnings section, Adverse reactions section, Precautions section
- source: PHONT
-
Pain
- Warnings section, Adverse reactions section, Precautions section
- source: PHONT
-
ESR1
- efficacy, Indications & usage section, Precautions section
- source: U.S. Food and Drug Administration
-
ESR2
- efficacy, Indications & usage section, Precautions section
- source: U.S. Food and Drug Administration
-
F2
- toxicity, Warnings section
- source: U.S. Food and Drug Administration
-
F5
- toxicity, Warnings section
- source: U.S. Food and Drug Administration
2. Annotation of HCSC Label for tamoxifen and CYP2D6,ESR1,ESR2
Summary
The product monograph for tamoxifen states that it is indicated for treatment of early breast cancer in women with estrogen receptor positive tumors. It also notes that individuals with low CYP2D6 activity (or using CYP2D6 inhibitors) may have reductions in plasma concentrations of the active metabolite of tamoxifen.
Annotation
Excerpts from the tamoxifen product monograph:
MYLAN-TAMOXIFEN (tamoxifen citrate) is indicated for the adjuvant treatment of early breast cancer in women with estrogen receptor positive tumours.
In patients with tumours positive for estrogen receptors, the response rate to endocrine therapy was approximately 56%; and in patients with tumours negative for estrogen receptors, the response rate was about 10%. It was concluded that estrogen receptor assays are useful in predicting the results of endocrine therapy in patients with breast cancer.
MYLAN-TAMOXIFEN is a pro-drug requiring metabolic activation by CYP2D6. Low CYP2D6 activity that occurs in patients harbouring certain CYP2D6 alleles (i.e. *4) or from the chronic use of CYP2D6 inhibitors can lead to persistent reductions in plasma concentrations of an active metabolite of tamoxifen citrate (endoxifen). Reduced efficacy on tamoxifen citrate has been reported with concomitant usage of some selective serotonin reuptake inhibitor (SSRI) antidepressants...Concurrent chronic use of CYP2D6 inhibitors that may affect tamoxifen citrate efficacy should be avoided if possible.
For the complete product monograph text with sections containing pharmacogenetic information highlighted, see the tamoxifen product monograph.
*Disclaimer: The contents of this page have not been endorsed by HCSC and are the sole responsibility of PharmGKB.
PharmGKB contains no Clinical Variants that meet the highest level of criteria.
To see more Clinical Variants with lower levels of criteria, click the button at the bottom of the page.
Disclaimer: The PharmGKB's clinical annotations reflect expert consensus based on clinical evidence and peer-reviewed literature available at the time they are written and are intended only to assist clinicians in decision-making and to identify questions for further research. New evidence may have emerged since the time an annotation was submitted to the PharmGKB. The annotations are limited in scope and are not applicable to interventions or diseases that are not specifically identified.
The annotations do not account for individual variations among patients, and cannot be considered inclusive of all proper methods of care or exclusive of other treatments. It remains the responsibility of the health-care provider to determine the best course of treatment for a patient. Adherence to any guideline is voluntary, with the ultimate determination regarding its application to be made solely by the clinician and the patient. PharmGKB assumes no responsibility for any injury or damage to persons or property arising out of or related to any use of the PharmGKB clinical annotations, or for any errors or omissions.
The table below contains information about pharmacogenomic variants on PharmGKB. Please follow the link in the "Variant" column for more information about a particular variant. Each link in the "Variant" column leads to the corresponding PharmGKB Variant Page. The Variant Page contains summary data, including PharmGKB manually curated information about variant-drug pairs based on individual PubMed publications. The PMIDs for these PubMed publications can be found on the Variant Page.
The tags in the first column of the table indicate what type of information can be found on the corresponding Variant Page.
Links in the "Gene" column lead to PharmGKB Gene Pages.
List of all variant annotations for tamoxifen
| Gene ? |
Variant?
(147) |
Alternate Names ? | Chemicals ? |
Alleles
?
(+ chr strand) |
Function ? |
Amino Acid?
Translation |
|
|---|---|---|---|---|---|---|---|
|
|
CYP2B6 | *1 | N/A | N/A | N/A | ||
|
|
CYP2B6 | *4 | N/A | N/A | N/A | ||
|
|
CYP2B6 | *5 | N/A | N/A | N/A | ||
|
|
CYP2B6 | *6 | N/A | N/A | N/A | ||
|
|
CYP2B6 | *22 | N/A | N/A | N/A | ||
|
|
CYP2C19 | *1 | N/A | N/A | N/A | ||
|
|
CYP2C19 | *1A | N/A | N/A | N/A | ||
|
|
CYP2C19 | *2 | N/A | N/A | N/A | ||
|
|
CYP2C19 | *2A | N/A | N/A | N/A | ||
|
|
CYP2C19 | *3 | N/A | N/A | N/A | ||
|
|
CYP2C19 | *17 | N/A | N/A | N/A | ||
|
|
CYP2C9 | *1 | N/A | N/A | N/A | ||
|
|
CYP2C9 | *2 | N/A | N/A | N/A | ||
|
|
CYP2C9 | *3 | N/A | N/A | N/A | ||
| VIP CA VA | CYP2D6 | *1 | N/A | N/A | N/A | ||
|
|
CYP2D6 | *1xN | N/A | N/A | N/A | ||
|
VIP
|
CYP2D6 | *2 | N/A | N/A | N/A | ||
|
|
CYP2D6 | *2A | N/A | N/A | N/A | ||
|
|
CYP2D6 | *2xN | N/A | N/A | N/A | ||
| VIP CA VA | CYP2D6 | *3 | N/A | N/A | N/A | ||
| VIP CA VA | CYP2D6 | *4 | N/A | N/A | N/A | ||
|
|
CYP2D6 | *4A | N/A | N/A | N/A | ||
|
|
CYP2D6 | *4D | N/A | N/A | N/A | ||
|
|
CYP2D6 | *5 | N/A | N/A | N/A | ||
| VIP CA VA | CYP2D6 | *6 | N/A | N/A | N/A | ||
|
|
CYP2D6 | *6B | N/A | N/A | N/A | ||
|
|
CYP2D6 | *7 | N/A | N/A | N/A | ||
|
VIP
|
CYP2D6 | *9 | N/A | N/A | N/A | ||
| VIP CA VA | CYP2D6 | *10 | N/A | N/A | N/A | ||
|
|
CYP2D6 | *10x2 | N/A | N/A | N/A | ||
|
|
CYP2D6 | *11 | N/A | N/A | N/A | ||
|
|
CYP2D6 | *14 | N/A | N/A | N/A | ||
|
VIP
|
CYP2D6 | *17 | N/A | N/A | N/A | ||
|
|
CYP2D6 | *18 | N/A | N/A | N/A | ||
|
|
CYP2D6 | *20 | N/A | N/A | N/A | ||
|
|
CYP2D6 | *21 | N/A | N/A | N/A | ||
|
VIP
|
CYP2D6 | *29 | N/A | N/A | N/A | ||
|
|
CYP2D6 | *35 | N/A | N/A | N/A | ||
|
|
CYP2D6 | *36 | N/A | N/A | N/A | ||
| VIP CA VA | CYP2D6 | *41 | N/A | N/A | N/A | ||
|
|
CYP2D6 | *87 | N/A | N/A | N/A | ||
|
|
CYP2D6 | *90 | N/A | N/A | N/A | ||
|
|
CYP2D6 | *91 | N/A | N/A | N/A | ||
|
|
CYP2D6 | *93 | N/A | N/A | N/A | ||
|
|
CYP2D6 | *95 | N/A | N/A | N/A | ||
|
|
CYP2D6 | *98 | N/A | N/A | N/A | ||
|
|
CYP3A4 | *1 | N/A | N/A | N/A | ||
|
|
CYP3A4 | *22 | N/A | N/A | N/A | ||
|
|
CYP3A5 | *1A | N/A | N/A | N/A | ||
|
|
CYP3A5 | *3A | N/A | N/A | N/A | ||
|
|
SULT1A1 | *1 | N/A | N/A | N/A | ||
|
|
SULT1A1 | *2 | N/A | N/A | N/A | ||
|
|
UGT1A4 | *1a | N/A | N/A | N/A | ||
|
|
UGT1A4 | *2 | N/A | N/A | N/A | ||
|
|
UGT1A4 | *3a | N/A | N/A | N/A | ||
|
|
UGT2B15 | *1 | N/A | N/A | N/A | ||
|
|
UGT2B15 | *2 | N/A | N/A | N/A | ||
| rs10030044 | NC_000004.11:g.157011923G>T, NC_000004.12:g.156090771G>T, rs58720270 |
G > T
|
SNP | ||||
| rs1045642 | NC_000007.13:g.87138645A>G, NC_000007.14:g.87509329A>G, NG_011513.1:g.208920T>C, NM_000927.4:c.3435T>C, NP_000918.2:p.Ile1145=, rs10239679, rs11568726, rs117328163, rs17210003, rs2229108, rs386513066, rs60023214, rs9690664 |
A > G
|
SNP |
I1145I
|
|||
| rs10509373 | NC_000010.10:g.78157572T>C, NC_000010.11:g.76397814T>C, NG_042180.1:g.971169T>C, NM_001305581.1:c.601+73329T>C, NM_032024.4:c.517+73329T>C, NR_131178.1:n.955+73329T>C, XM_005270212.1:c.601+73329T>C, XM_005270212.2:c.601+73329T>C, XM_011540257.1:c.517-159395T>C, XR_945833.1:n.992+51261T>C, rs17380054, rs56489054, rs59928153 |
T > C
|
SNP | ||||
| rs1065852 | NC_000022.10:g.42526694G=, NC_000022.10:g.42526694G>A, NC_000022.11:g.42130692G=, NC_000022.11:g.42130692G>A, NG_008376.3:g.4300C=, NG_008376.3:g.4300C>T, NM_000106.5:c.100C=, NM_000106.5:c.100C>T, NM_001025161.2:c.100C=, NM_001025161.2:c.100C>T, NP_000097.3:p.Pro34=, NP_000097.3:p.Pro34Ser, NP_001020332.2:p.Pro34=, NP_001020332.2:p.Pro34Ser, NT_187682.1:g.53033G=, NT_187682.1:g.53033G>A, NW_004504305.1:g.53019A=, NW_004504305.1:g.53019A>G, NW_009646208.1:g.16258A=, NW_009646208.1:g.16258A>G, XM_005278353.1:c.100T=, XM_005278353.1:c.100T>C, XM_005278354.1:c.-1454C>T, XM_005278354.1:c.-1454T>C, XM_005278354.3:c.-1454C>T, XM_005278354.3:c.-1454T>C, XM_011529966.1:c.100C=, XM_011529966.1:c.100C>T, XM_011529967.1:c.100C=, XM_011529967.1:c.100C>T, XM_011529968.1:c.100C=, XM_011529968.1:c.100C>T, XM_011529969.1:c.37+605C>T, XM_011529969.1:c.37+605T>C, XM_011529970.1:c.100C=, XM_011529970.1:c.100C>T, XM_011529971.1:c.37+605C>T, XM_011529971.1:c.37+605T>C, XM_011529972.1:c.100C=, XM_011529972.1:c.100C>T, XM_011547541.1:c.-1454C>T, XM_011547541.1:c.-1454T>C, XM_011547750.1:c.37+605C>T, XM_011547750.1:c.37+605T>C, XM_011547751.1:c.-1114C>T, XM_011547751.1:c.-1114T>C, XM_011547756.1:c.42+469A>G, XM_011547756.1:c.42+469G>A, XM_011548819.1:c.-1454C>T, XM_011548819.1:c.-1454T>C, XP_005278410.1:p.Ser34=, XP_005278410.1:p.Ser34Pro, XP_011528268.1:p.Pro34=, XP_011528268.1:p.Pro34Ser, XP_011528269.1:p.Pro34=, XP_011528269.1:p.Pro34Ser, XP_011528270.1:p.Pro34=, XP_011528270.1:p.Pro34Ser, XP_011528272.1:p.Pro34=, XP_011528272.1:p.Pro34Ser, XP_011528274.1:p.Pro34=, XP_011528274.1:p.Pro34Ser, XR_430455.2:n.328+4A>G, XR_430455.2:n.328+4G>A, XR_952536.1:n.-1751A>G, XR_952536.1:n.-1751G>A, XR_952537.1:n.-1751A>G, XR_952537.1:n.-1751G>A, XR_952538.1:n.-1751A>G, XR_952538.1:n.-1751G>A, XR_952539.1:n.-1462A>G, XR_952539.1:n.-1462G>A, XR_952745.1:n.1257C=, XR_952745.1:n.1257C>T, rs117813846, rs58862176 |
G > A
|
SNP |
P34S
|
|||
| rs11023197 | NC_000011.10:g.14359452G>A, NC_000011.9:g.14380998G>A, NG_017058.1:g.10055C>T, NM_001102669.2:c.-1319C>T, NM_001177314.1:c.3+4939C>T, NM_001177315.1:c.-1338C>T, NM_012250.5:c.-582C>T, NW_003871075.1:g.417536G>A, XM_005252827.1:c.-917C>T, XM_005252828.1:c.-582C>T, XM_005277702.1:c.-917C>T, XM_005277703.1:c.-582C>T |
G > A
|
SNP | ||||
| rs12248560 | NC_000010.10:g.96521657C>T, NC_000010.11:g.94761900C>T, NG_008384.2:g.4195C>T, NM_000769.2:c.-806C>T, rs117093607, rs17442305, rs17879736 |
C > A
C > T
|
SNP | ||||
| rs16947 | NC_000022.10:g.42523943A=, NC_000022.10:g.42523943A>G, NC_000022.11:g.42127941G=, NC_000022.11:g.42127941G>A, NG_008376.3:g.7051C=, NG_008376.3:g.7051C>T, NM_000106.5:c.886C=, NM_000106.5:c.886C>T, NM_001025161.2:c.733C=, NM_001025161.2:c.733C>T, NP_000097.3:p.Arg296=, NP_000097.3:p.Arg296Cys, NP_001020332.2:p.Arg245=, NP_001020332.2:p.Arg245Cys, NT_187682.1:g.50282A=, NT_187682.1:g.50282A>G, NW_004504305.1:g.50268G=, NW_004504305.1:g.50268G>A, NW_009646208.1:g.13507G=, NW_009646208.1:g.13507G>A, XM_005278353.1:c.742C=, XM_005278353.1:c.742C>T, XM_005278354.1:c.586C=, XM_005278354.1:c.586C>T, XM_005278354.3:c.586C=, XM_005278354.3:c.586C>T, XM_011529966.1:c.886C=, XM_011529966.1:c.886C>T, XM_011529967.1:c.886C=, XM_011529967.1:c.886C>T, XM_011529968.1:c.886C=, XM_011529968.1:c.886C>T, XM_011529969.1:c.742C=, XM_011529969.1:c.742C>T, XM_011529970.1:c.733C=, XM_011529970.1:c.733C>T, XM_011529971.1:c.742C=, XM_011529971.1:c.742C>T, XM_011529972.1:c.843+233C>T, XM_011529972.1:c.843+233T>C, XM_011547541.1:c.586C=, XM_011547541.1:c.586C>T, XM_011547750.1:c.742T=, XM_011547750.1:c.742T>C, XM_011547751.1:c.670T=, XM_011547751.1:c.670T>C, XM_011547756.1:c.-2094A>G, XM_011547756.1:c.-2094G>A, XM_011548819.1:c.586C=, XM_011548819.1:c.586C>T, XP_005278410.1:p.Arg248=, XP_005278410.1:p.Arg248Cys, XP_005278411.1:p.Arg196=, XP_005278411.1:p.Arg196Cys, XP_011528268.1:p.Arg296=, XP_011528268.1:p.Arg296Cys, XP_011528269.1:p.Arg296=, XP_011528269.1:p.Arg296Cys, XP_011528270.1:p.Arg296=, XP_011528270.1:p.Arg296Cys, XP_011528271.1:p.Arg248=, XP_011528271.1:p.Arg248Cys, XP_011528272.1:p.Arg245=, XP_011528272.1:p.Arg245Cys, XP_011528273.1:p.Arg248=, XP_011528273.1:p.Arg248Cys, XP_011545843.1:p.Arg196=, XP_011545843.1:p.Arg196Cys, XP_011546052.1:p.Cys248=, XP_011546052.1:p.Cys248Arg, XP_011546053.1:p.Cys224=, XP_011546053.1:p.Cys224Arg, XP_011547121.1:p.Arg196=, XP_011547121.1:p.Arg196Cys, XR_430455.2:n.-1930A>G, XR_430455.2:n.-1930G>A, XR_952745.1:n.2000+233C>T, XR_952745.1:n.2000+233T>C, rs117039205, rs57836231 |
A > G
|
SNP |
R296C
|
|||
| rs1801123 | NC_000002.11:g.227661043T>C, NC_000002.12:g.226796327T>C, NG_015830.1:g.7464A>G, NM_005544.2:c.2412A>G, NP_005535.1:p.Ala804=, XM_005246534.1:c.2412A>G, XP_005246591.1:p.Ala804=, rs117291937, rs3731595 |
T > C
|
SNP |
A804A
|
|||
| rs1804645 | NC_000002.11:g.24974958C>T, NC_000002.12:g.24752089C>T, NG_029014.1:g.172613C>T, NM_003743.4:c.3814C>T, NM_147223.2:c.3814C>T, NM_147233.2:c.3814C>T, NP_003734.3:p.Pro1272Ser, NP_671756.1:p.Pro1272Ser, NP_671766.1:p.Pro1272Ser, XM_005264625.1:c.3814C>T, XM_005264626.1:c.3814C>T, XM_005264627.1:c.3814C>T, XM_005264628.1:c.3814C>T, XM_011533141.1:c.3499C>T, XP_005264682.1:p.Pro1272Ser, XP_005264683.1:p.Pro1272Ser, XP_005264684.1:p.Pro1272Ser, XP_005264685.1:p.Pro1272Ser, XP_011531443.1:p.Pro1167Ser, rs17838346 |
C > T
|
SNP |
P1272S
|
|||
| rs2011425 | NC_000002.11:g.234627608T>G, NC_000002.12:g.233718962T>G, NG_002601.2:g.134219T>G, NM_001072.3:c.861+25097T>G, NM_007120.2:c.142T>G, NM_019075.2:c.856-48072T>G, NM_019076.4:c.856-48072T>G, NM_019077.2:c.855+36170T>G, NM_019078.1:c.867+5104T>G, NM_021027.2:c.855+46173T>G, NM_205862.1:c.60+25097T>G, NP_009051.1:p.Leu48Val, XR_241238.1:n.198T>G, XR_241240.1:n.1022+25097T>G, XR_241241.1:n.941+46173T>G, rs16849670, rs17866635, rs58554624 |
T > G
|
SNP |
L48V
|
|||
| rs2016347 | NC_000015.10:g.98960571G>T, NC_000015.9:g.99503800G>T, NG_009492.1:g.316040G>T, NM_000875.4:c.*3129G>T, NM_001291858.1:c.*3129G>T, XM_005254896.1:c.*3129G>T, XM_005254897.1:c.*3129G>T, XM_011521513.1:c.*3129G>T, XM_011521514.1:c.*2643G>T, XM_011521515.1:c.*3129G>T, XM_011521516.1:c.*3129G>T, XM_011521517.1:c.*3129G>T, rs17714510, rs3825953 |
G > T
|
SNP | ||||
| rs2032582 | NC_000007.13:g.87160618A>C, NC_000007.13:g.87160618A>T, NC_000007.14:g.87531302A>C, NC_000007.14:g.87531302A>T, NG_011513.1:g.186947T>A, NG_011513.1:g.186947T>G, NM_000927.4:c.2677T>A, NM_000927.4:c.2677T>G, NP_000918.2:p.Ser893Ala, NP_000918.2:p.Ser893Thr, rs10228331, rs2229106, rs386553610, rs57135550, rs9641018 |
A > C
A > T
|
SNP |
S893A
|
|||
| rs2273697 | NC_000010.10:g.101563815G>A, NC_000010.11:g.99804058G>A, NG_011798.1:g.26353G>A, NM_000392.4:c.1249G>A, NP_000383.1:p.Val417Ile, XM_005269536.1:c.1249G>A, XM_006717630.2:c.553G>A, XM_006717631.2:c.1249G>A, XM_011539291.1:c.1249G>A, XP_005269593.1:p.Val417Ile, XP_006717693.1:p.Val185Ile, XP_006717694.1:p.Val417Ile, XP_011537593.1:p.Val417Ile, XR_945604.1:n.1438G>A, XR_945605.1:n.1440G>A, rs17216184, rs60620335 |
G > A
|
SNP |
V417I
|
|||
| rs2306283 | NC_000012.11:g.21329738A>G, NC_000012.12:g.21176804A>G, NG_011745.1:g.50611A>G, NM_006446.4:c.388A>G, NP_006437.3:p.Asn130Asp, rs17389242, rs52832430, rs60767041 |
A > G
|
SNP |
N130D
|
|||
| rs2740574 | NC_000007.13:g.99382096C>T, NC_000007.14:g.99784473C>T, NG_008421.1:g.4713G>A, NM_001202855.2:c.-392G>A, NM_017460.5:c.-392G>A, XM_011515841.1:c.-392G>A, XM_011515842.1:c.-392G>A, rs3176920, rs36231114, rs59393892 |
C > T
|
SNP | ||||
| rs28371706 | NC_000022.10:g.42525772G>A, NC_000022.11:g.42129770G>A, NG_008376.3:g.5222C>T, NM_000106.5:c.320C>T, NM_001025161.2:c.320C>T, NP_000097.3:p.Thr107Ile, NP_001020332.2:p.Thr107Ile, NT_187682.1:g.52111G>A, NW_004504305.1:g.52097G>A, NW_009646208.1:g.15336G>A, XM_005278353.1:c.320C>T, XM_005278354.1:c.-532C>T, XM_005278354.3:c.-532C>T, XM_011529966.1:c.320C>T, XM_011529967.1:c.320C>T, XM_011529968.1:c.320C>T, XM_011529969.1:c.177C>T, XM_011529970.1:c.320C>T, XM_011529971.1:c.177C>T, XM_011529972.1:c.320C>T, XM_011547541.1:c.-532C>T, XM_011547750.1:c.177C>T, XM_011547751.1:c.-192C>T, XM_011547756.1:c.-265G>A, XM_011548819.1:c.-532C>T, XP_005278410.1:p.Thr107Ile, XP_011528268.1:p.Thr107Ile, XP_011528269.1:p.Thr107Ile, XP_011528270.1:p.Thr107Ile, XP_011528271.1:p.His59=, XP_011528272.1:p.Thr107Ile, XP_011528273.1:p.His59=, XP_011528274.1:p.Thr107Ile, XP_011546052.1:p.His59=, XR_430455.2:n.-101G>A, XR_952745.1:n.1477C>T, rs587777915, rs59604033 |
G > A
|
SNP |
T107I
|
|||
| rs28371725 | NC_000022.10:g.42523805C>T, NC_000022.11:g.42127803C>T, NG_008376.3:g.7189G>A, NM_000106.5:c.985+39G>A, NM_001025161.2:c.832+39G>A, NT_187682.1:g.50144C>T, NW_004504305.1:g.50130C>T, NW_009646208.1:g.13369C>T, XM_005278353.1:c.841+39G>A, XM_005278354.1:c.685+39G>A, XM_005278354.3:c.685+39G>A, XM_011529966.1:c.985+39G>A, XM_011529967.1:c.985+39G>A, XM_011529968.1:c.985+39G>A, XM_011529969.1:c.841+39G>A, XM_011529970.1:c.832+39G>A, XM_011529971.1:c.841+39G>A, XM_011529972.1:c.844-169G>A, XM_011547541.1:c.724G>A, XM_011547750.1:c.841+39G>A, XM_011547751.1:c.769+39G>A, XM_011548819.1:c.724G>A, XP_011545843.1:p.Glu242Lys, XP_011547121.1:p.Glu242Lys, XR_952745.1:n.2001-169G>A, rs57124011, rs587777916 |
C > T
|
SNP | ||||
| rs2854744 | NC_000007.13:g.45961075G>T, NC_000007.14:g.45921476G>T, NG_011508.1:g.4797C>A, NM_000598.4:c.-336C>A, NM_001013398.1:c.-336C>A, XM_005249743.1:c.-336C>A |
G > T
|
SNP | ||||
| rs2946834 | NC_000012.11:g.102787814A>G, NC_000012.12:g.102394036A>G, NG_011713.1:g.91565T>C, XR_945270.1:n.582-10077A>G, XR_945271.1:n.582-10077A>G, XR_945272.1:n.582-10077A>G, XR_945273.1:n.532-10077A>G, XR_945274.1:n.258-10077A>G, XR_945275.1:n.138-10077A>G, XR_945276.1:n.110-10077A>G, XR_945277.1:n.582-10077A>G, rs17880061, rs61280983 |
A > G
|
SNP | ||||
| rs310786 | NC_000012.11:g.77436148C>T, NC_000012.12:g.77042368C>T, NM_203394.2:c.1123+697G>A, XM_011537966.1:c.988+2269G>A, XM_011537967.1:c.847+697G>A, XM_011537968.1:c.832+697G>A, XM_011537969.1:c.820+697G>A, rs58107313 |
C > T
|
SNP | ||||
| rs3213619 | NC_000007.13:g.87230193A>G, NC_000007.14:g.87600877A>G, NG_011513.1:g.117372T>C, NM_000927.4:c.-129T>C, rs17249446, rs60679736 |
A > G
|
SNP | ||||
| rs35742686 | NC_000022.10:g.42524244delT, NC_000022.11:g.42128242delT, NG_008376.3:g.6750delA, NM_000106.5:c.775delA, NM_001025161.2:c.622delA, NP_000097.3:p.Arg259Glyfs, NP_001020332.2:p.Arg208Glyfs, NT_187682.1:g.50583delT, NW_004504305.1:g.50569delT, NW_009646208.1:g.13808delT, XM_005278353.1:c.631delA, XM_005278354.1:c.475delA, XM_005278354.3:c.475delA, XM_011529966.1:c.775delA, XM_011529967.1:c.775delA, XM_011529968.1:c.775delA, XM_011529969.1:c.631delA, XM_011529970.1:c.622delA, XM_011529971.1:c.631delA, XM_011529972.1:c.775delA, XM_011547541.1:c.475delA, XM_011547750.1:c.631delA, XM_011547751.1:c.559delA, XM_011547756.1:c.-1793delT, XM_011548819.1:c.475delA, XP_005278410.1:p.Arg211Glyfs, XP_005278411.1:p.Arg159Glyfs, XP_011528268.1:p.Arg259Glyfs, XP_011528269.1:p.Arg259Glyfs, XP_011528270.1:p.Arg259Glyfs, XP_011528271.1:p.Arg211Glyfs, XP_011528272.1:p.Arg208Glyfs, XP_011528273.1:p.Arg211Glyfs, XP_011528274.1:p.Arg259Glyfs, XP_011545843.1:p.Arg159Glyfs, XP_011546052.1:p.Arg211Glyfs, XP_011546053.1:p.Arg187Glyfs, XP_011547121.1:p.Arg159Glyfs, XR_430455.2:n.-1629delT, XR_952745.1:n.1932delA, rs45593132, rs60790764 |
T > -
T > T
|
indel |
R259G
|
|||
| rs3732219 | NC_000002.11:g.234627248C>T, NC_000002.12:g.233718602C>T, NG_002601.2:g.133859C>T, NM_001072.3:c.861+24737C>T, NM_007120.2:c.-219C>T, NM_019075.2:c.856-48432C>T, NM_019076.4:c.856-48432C>T, NM_019077.2:c.855+35810C>T, NM_019078.1:c.867+4744C>T, NM_021027.2:c.855+45813C>T, NM_205862.1:c.60+24737C>T, XR_241238.1:n.-163C>T, XR_241240.1:n.1022+24737C>T, XR_241241.1:n.941+45813C>T, rs60036812 |
C > T
|
SNP | ||||
| rs3740065 | NC_000010.10:g.101605693A>G, NC_000010.11:g.99845936A>G, NG_011798.1:g.68231A>G, NM_000392.4:c.4146+154A>G, XM_005269536.1:c.3867+154A>G, XM_006717630.2:c.3450+154A>G, XR_945604.1:n.4276+154A>G, XR_945605.1:n.4210+154A>G, rs386585170, rs61012324 |
A > G
|
SNP | ||||
| rs3892097 | NC_000022.10:g.42524947C=, NC_000022.10:g.42524947C>T, NC_000022.11:g.42128945C=, NC_000022.11:g.42128945C>T, NG_008376.3:g.6047G=, NG_008376.3:g.6047G>A, NM_000106.5:c.506-1A>G, NM_000106.5:c.506-1G>A, NM_001025161.2:c.353-1A>G, NM_001025161.2:c.353-1G>A, NT_187682.1:g.51286C=, NT_187682.1:g.51286C>T, NW_004504305.1:g.51272T=, NW_004504305.1:g.51272T>C, NW_009646208.1:g.14511C=, NW_009646208.1:g.14511C>T, XM_005278353.1:c.363-2A>G, XM_005278353.1:c.363-2G>A, XM_005278354.1:c.207-2A>G, XM_005278354.1:c.207-2G>A, XM_005278354.3:c.207-2A>G, XM_005278354.3:c.207-2G>A, XM_011529966.1:c.506-1A>G, XM_011529966.1:c.506-1G>A, XM_011529967.1:c.506-1A>G, XM_011529967.1:c.506-1G>A, XM_011529968.1:c.506-1A>G, XM_011529968.1:c.506-1G>A, XM_011529969.1:c.363-2A>G, XM_011529969.1:c.363-2G>A, XM_011529970.1:c.353-1A>G, XM_011529970.1:c.353-1G>A, XM_011529971.1:c.363-2A>G, XM_011529971.1:c.363-2G>A, XM_011529972.1:c.506-1A>G, XM_011529972.1:c.506-1G>A, XM_011547541.1:c.207-2A>G, XM_011547541.1:c.207-2G>A, XM_011547750.1:c.363-2A>G, XM_011547750.1:c.363-2G>A, XM_011547751.1:c.290-1A>G, XM_011547751.1:c.290-1G>A, XM_011547756.1:c.-1090C>T, XM_011547756.1:c.-1090T>C, XM_011548819.1:c.207-2A>G, XM_011548819.1:c.207-2G>A, XR_430455.2:n.-926C>T, XR_430455.2:n.-926T>C, XR_952745.1:n.1663-1A>G, XR_952745.1:n.1663-1G>A, rs1800716, rs28371711, rs60082401, rs606231227 |
C > T
|
SNP | ||||
| rs4149056 | NC_000012.11:g.21331549T>C, NC_000012.12:g.21178615T>C, NG_011745.1:g.52422T>C, NM_006446.4:c.521T>C, NP_006437.3:p.Val174Ala, rs52816141, rs60037639 |
T > C
|
SNP |
V174A
|
|||
| rs4646 | NC_000015.10:g.51210647A>C, NC_000015.9:g.51502844A>C, NG_007982.1:g.132952T>G, NM_000103.3:c.*161T>G, NM_031226.2:c.*161T>G, XM_005254190.1:c.*161T>G, XM_005254191.1:c.*161T>G, XM_005254192.1:c.*161T>G, XR_932222.1:n.99-67336A>C, rs16964193, rs3191019, rs58335330 |
A > C
|
SNP | ||||
| rs478437 | NC_000007.13:g.144793834C>T, NC_000007.14:g.145096741C>T, XR_928090.1:n.1728+242C>T |
C > T
|
SNP | ||||
| rs4986938 | NC_000014.8:g.64699816C>T, NC_000014.9:g.64233098C>T, NG_011535.1:g.110453G>A, NM_001040275.1:c.1406+1872G>A, NM_001214902.1:c.1406+1872G>A, NM_001271876.1:c.1406+1872G>A, NM_001271877.1:c.*39G>A, NM_001291712.1:c.1406+1872G>A, NM_001291723.1:c.1406+1872G>A, NM_001437.2:c.*39G>A, NR_073496.1:n.2010+1872G>A, NR_073497.1:n.1600G>A, NR_073505.1:n.2149+1872G>A, XM_011536545.1:c.1406+1872G>A, XM_011536546.1:c.*39G>A, rs17766687, rs386597008 |
C > -
C > T
|
SNP | ||||
| rs5030655 | NC_000022.10:g.42525086delA, NC_000022.11:g.42129084delA, NG_008376.3:g.5908delT, NM_000106.5:c.454delT, NM_001025161.2:c.353-140delT, NP_000097.3:p.Trp152Glyfs, NT_187682.1:g.51425delA, NW_004504305.1:g.51411delA, NW_009646208.1:g.14650delA, XM_005278353.1:c.363-141delT, XM_005278354.1:c.155delT, XM_005278354.3:c.155delT, XM_011529966.1:c.454delT, XM_011529967.1:c.454delT, XM_011529968.1:c.454delT, XM_011529969.1:c.311delT, XM_011529970.1:c.353-140delT, XM_011529971.1:c.311delT, XM_011529972.1:c.454delT, XM_011547541.1:c.155delT, XM_011547750.1:c.311delT, XM_011547751.1:c.238delT, XM_011547756.1:c.-951delA, XM_011548819.1:c.155delT, XP_005278411.1:p.Val52Glyfs, XP_011528268.1:p.Trp152Glyfs, XP_011528269.1:p.Trp152Glyfs, XP_011528270.1:p.Trp152Glyfs, XP_011528271.1:p.Val104Glyfs, XP_011528273.1:p.Val104Glyfs, XP_011528274.1:p.Trp152Glyfs, XP_011545843.1:p.Val52Glyfs, XP_011546052.1:p.Val104Glyfs, XP_011546053.1:p.Trp80Glyfs, XP_011547121.1:p.Val52Glyfs, XR_430455.2:n.-787delA, XR_952745.1:n.1611delT, rs11568727, rs28371709 |
A > -
A > A
|
indel |
W152G
|
|||
| rs5030656 | NC_000022.10:g.42524176_42524178delCTT, NC_000022.11:g.42128174_42128176delCTT, NG_008376.3:g.6816_6818delAAG, NM_000106.5:c.841_843delAAG, NM_001025161.2:c.688_690delAAG, NP_000097.3:p.Lys281del, NP_001020332.2:p.Lys230del, NT_187682.1:g.50515_50517delCTT, NW_004504305.1:g.50501_50503delCTT, NW_009646208.1:g.13740_13742delCTT, XM_005278353.1:c.697_699delAAG, XM_005278354.1:c.541_543delAAG, XM_005278354.3:c.541_543delAAG, XM_011529966.1:c.841_843delAAG, XM_011529967.1:c.841_843delAAG, XM_011529968.1:c.841_843delAAG, XM_011529969.1:c.697_699delAAG, XM_011529970.1:c.688_690delAAG, XM_011529971.1:c.697_699delAAG, XM_011529972.1:c.841_843delAAG, XM_011547541.1:c.541_543delAAG, XM_011547750.1:c.697_699delAAG, XM_011547751.1:c.625_627delAAG, XM_011547756.1:c.-1861_-1859del, XM_011548819.1:c.541_543delAAG, XP_005278410.1:p.Lys233del, XP_005278411.1:p.Lys181del, XP_011528268.1:p.Lys281del, XP_011528269.1:p.Lys281del, XP_011528270.1:p.Lys281del, XP_011528271.1:p.Lys233del, XP_011528272.1:p.Lys230del, XP_011528273.1:p.Lys233del, XP_011528274.1:p.Lys281del, XP_011545843.1:p.Lys181del, XP_011546052.1:p.Lys233del, XP_011546053.1:p.Lys209del, XP_011547121.1:p.Lys181del, XR_430455.2:n.-1697_-1695del, XR_952745.1:n.1998_2000delAAG, rs587777919 |
CTT > -
CTT > CTT
|
indel | ||||
| rs59421388 | NC_000022.10:g.42523610C>T, NC_000022.11:g.42127608C>T, NG_008376.3:g.7384G>A, NM_000106.5:c.1012G>A, NM_001025161.2:c.859G>A, NP_000097.3:p.Val338Met, NP_001020332.2:p.Val287Met, NT_187682.1:g.49949C>T, NW_004504305.1:g.49935C>T, NW_009646208.1:g.13174C>T, XM_005278353.1:c.868G>A, XM_005278354.1:c.712G>A, XM_005278354.3:c.712G>A, XM_011529966.1:c.1012G>A, XM_011529967.1:c.1012G>A, XM_011529968.1:c.1012G>A, XM_011529969.1:c.868G>A, XM_011529970.1:c.859G>A, XM_011529971.1:c.868G>A, XM_011529972.1:c.870G>A, XM_011547541.1:c.*118G>A, XM_011547750.1:c.868G>A, XM_011547751.1:c.796G>A, XM_011548819.1:c.*118G>A, XP_005278410.1:p.Val290Met, XP_005278411.1:p.Val238Met, XP_011528268.1:p.Val338Met, XP_011528269.1:p.Val338Met, XP_011528270.1:p.Val338Met, XP_011528271.1:p.Val290Met, XP_011528272.1:p.Val287Met, XP_011528273.1:p.Val290Met, XP_011528274.1:p.Thr290=, XP_011546052.1:p.Val290Met, XP_011546053.1:p.Val266Met, XR_952745.1:n.2027G>A |
C > T
|
SNP |
V338M
|
|||
| rs6025 | NC_000001.10:g.169519049T=, NC_000001.10:g.169519049T>C, NC_000001.11:g.169549811C=, NC_000001.11:g.169549811C>T, NG_011806.1:g.41721G=, NG_011806.1:g.41721G>A, NM_000130.4:c.1601G=, NM_000130.4:c.1601G>A, NP_000121.2:p.Arg534=, NP_000121.2:p.Arg534Gln, rs1801711, rs60031897 |
T > C
|
SNP |
R534Q
|
|||
| rs61736512 | NC_000022.10:g.42525134C>T, NC_000022.11:g.42129132C>T, NG_008376.3:g.5860G>A, NM_000106.5:c.406G>A, NM_001025161.2:c.353-188G>A, NP_000097.3:p.Val136Met, NT_187682.1:g.51473C>T, NW_004504305.1:g.51459C>T, NW_009646208.1:g.14698C>T, XM_005278353.1:c.363-189G>A, XM_005278354.1:c.107G>A, XM_005278354.3:c.107G>A, XM_011529966.1:c.406G>A, XM_011529967.1:c.406G>A, XM_011529968.1:c.406G>A, XM_011529969.1:c.263G>A, XM_011529970.1:c.353-188G>A, XM_011529971.1:c.263G>A, XM_011529972.1:c.406G>A, XM_011547541.1:c.107G>A, XM_011547750.1:c.263G>A, XM_011547751.1:c.190G>A, XM_011547756.1:c.-903C>T, XM_011548819.1:c.107G>A, XP_005278411.1:p.Arg36His, XP_011528268.1:p.Val136Met, XP_011528269.1:p.Val136Met, XP_011528270.1:p.Val136Met, XP_011528271.1:p.Arg88His, XP_011528273.1:p.Arg88His, XP_011528274.1:p.Val136Met, XP_011545843.1:p.Arg36His, XP_011546052.1:p.Arg88His, XP_011546053.1:p.Val64Ile, XP_011547121.1:p.Arg36His, XR_430455.2:n.-739C>T, XR_952745.1:n.1563G>A |
C > T
|
SNP |
V136M
|
|||
| rs6214 | NC_000012.11:g.102793569C>T, NC_000012.12:g.102399791C>T, NG_011713.1:g.85810G>A, NM_000618.4:c.*2716G>A, NM_001111283.2:c.*2750G>A, NM_001111284.1:c.*2716G>A, XR_944534.1:n.5737G>A, XR_944535.1:n.5514G>A, XR_944536.1:n.5499G>A, XR_945270.1:n.582-4322C>T, XR_945271.1:n.582-4322C>T, XR_945272.1:n.582-4322C>T, XR_945273.1:n.532-4322C>T, XR_945274.1:n.258-4322C>T, XR_945275.1:n.138-4322C>T, XR_945276.1:n.110-4322C>T, XR_945277.1:n.582-4322C>T, rs17847190, rs17882460, rs3730225, rs386601958, rs60827480 |
C > T
|
SNP | ||||
| rs7136446 | NC_000012.11:g.102838515C>T, NC_000012.12:g.102444737C>T, NG_011713.1:g.40864G>A, NM_000618.4:c.221-25047G>A, NM_001111283.2:c.221-25047G>A, NM_001111284.1:c.173-25047G>A, NM_001111285.1:c.221-25047G>A, XM_005268835.1:c.173-25047G>A, XM_005268836.1:c.152-25047G>A, XR_944534.1:n.480-25047G>A, XR_944535.1:n.257-25047G>A, XR_944536.1:n.242-25047G>A, XR_945270.1:n.6686-17991C>T, XR_945271.1:n.5739-17991C>T, XR_945272.1:n.6686-11050C>T, XR_945273.1:n.6636-17991C>T, XR_945274.1:n.6362-17991C>T, XR_945275.1:n.6242-17991C>T, XR_945276.1:n.6214-17991C>T, XR_945277.1:n.2310-17991C>T, rs17728283, rs386607780, rs60425451 |
C > T
|
SNP | ||||
| rs717620 | NC_000010.10:g.101542578C>T, NC_000010.11:g.99782821C>T, NG_011798.1:g.5116C>T, NM_000392.4:c.-24C>T, XM_005269536.1:c.-24C>T, XM_006717631.2:c.-24C>T, XM_011539291.1:c.-24C>T, XR_945604.1:n.166C>T, XR_945605.1:n.168C>T, rs17216163, rs386485129, rs58371376 |
C > T
|
SNP | ||||
| rs776746 | NC_000007.13:g.99270539C>T, NC_000007.14:g.99672916T>C, NG_007938.1:g.12083G=, NG_007938.1:g.12083G>A, NM_000777.4:c.219-237A>G, NM_000777.4:c.219-237G>A, NM_001190484.2:c.219-237A>G, NM_001190484.2:c.219-237G>A, NM_001291829.1:c.-253-1A>G, NM_001291829.1:c.-253-1G>A, NM_001291830.1:c.189-237A>G, NM_001291830.1:c.189-237G>A, NR_033807.2:n.717-1A>G, NR_033807.2:n.717-1G>A, NR_033808.1:n.689-1G>A, NR_033809.1:n.581-237G>A, NR_033810.1:n.689-1G>A, NR_033811.1:n.321-1G>A, NR_033812.1:n.321-1G>A, XM_005250169.1:c.189-237G>A, XM_005250170.1:c.-357-1G>A, XM_005250171.1:c.-253-1G>A, XM_005250172.1:c.-254G>A, XM_005250173.1:c.-331-237G>A, XM_005250198.1:c.806-4288C>T, XM_006715859.2:c.219-237A>G, XM_011515843.1:c.-254A>G, XM_011515844.1:c.-229-237A>G, XM_011515845.1:c.-463-1A>G, XM_011515846.1:c.-331-237A>G, XM_011515847.1:c.-571-1A>G, XR_927383.1:n.344-237A>G, XR_927402.1:n.1466+48736T>C, rs10361242, rs11266830, rs386613022, rs58244770 |
C > T
|
SNP | ||||
| rs8060157 | NC_000016.10:g.49796293A>G, NC_000016.9:g.49830204A>G, NG_032972.1:g.66627T>C, NM_001271620.1:c.-164-6747T>C, NM_015069.3:c.17-6747T>C, XM_005255854.1:c.110-6747T>C, XM_005255855.1:c.23-6747T>C, XM_006721171.2:c.62-6747T>C, XM_011522962.1:c.110-6747T>C, rs58020317 |
A > G
|
SNP | ||||
| rs8330 | NC_000002.11:g.234681645G>C, NC_000002.12:g.233772999G>C, NG_002601.2:g.188256G>C, NG_033238.1:g.17727G>C, NM_000463.2:c.*440G>C, NM_001072.3:c.*440G>C, NM_007120.2:c.*440G>C, NM_019075.2:c.*440G>C, NM_019076.4:c.*440G>C, NM_019077.2:c.*440G>C, NM_019078.1:c.*440G>C, NM_019093.2:c.*440G>C, NM_021027.2:c.*440G>C, NM_205862.1:c.*440G>C, XR_241238.1:n.2235G>C, rs3182134, rs35609787, rs386496306, rs57500970 |
G > C
|
SNP | ||||
| rs9282861 | NC_000016.10:g.28606193C>T, NC_000016.9:g.28617514C>T, NG_028128.1:g.22353G>A, NM_001055.3:c.638G>A, NM_001310136.1:c.121-139291G>A, NM_177529.2:c.638G>A, NM_177530.2:c.638G>A, NM_177534.2:c.638G>A, NM_177536.3:c.404G>A, NP_001046.2:p.Arg213His, NP_803565.1:p.Arg213His, NP_803566.1:p.Arg213His, NP_803878.1:p.Arg213His, NP_803880.1:p.Arg135His, XM_005255522.1:c.638G>A, XP_005255579.1:p.Arg213His, rs17844870, rs17857585 |
C > T
|
SNP |
R213H
|
|||
| rs9340799 | NC_000006.11:g.152163381A>G, NC_000006.12:g.151842246A>G, NG_008493.1:g.156751A>G, NM_000125.3:c.453-351A>G, NM_001122740.1:c.453-351A>G, NM_001122741.1:c.453-351A>G, NM_001122742.1:c.453-351A>G, NM_001291230.1:c.453-351A>G, NM_001291241.1:c.453-351A>G, XM_005266856.1:c.453-351A>G, XM_005266857.1:c.453-351A>G, XM_006715374.2:c.453-351A>G, XM_006715375.2:c.-67-351A>G, XM_011535543.1:c.453-351A>G, XM_011535544.1:c.453-351A>G, XM_011535545.1:c.453-351A>G, XM_011535546.1:c.453-351A>G, XM_011535547.1:c.453-351A>G, XM_011535548.1:c.-67-351A>G, rs17208058, rs59875577 |
A > G
|
SNP |
Overview
- Tamoxifen Citrate
- Tamoxifene [INN-French]
- Tamoxifeno [INN-Spanish]
- Tamoxifenum [INN-Latin]
- Trans-Tamoxifen
- Apo-Tamox
- Citofen
- Crisafeno
- Diemon
- Gen-Tamoxifen
- Istubol
- Kessar
- Noltam
- Nolvadex
- Nolvadex-D
- Nourytam
- Novo-Tamoxifen
- Oncomox
- PMS-Tamoxifen
- Retaxim
- Tamizam
- Tamofen
- Tamone
- Tamoxasta
- Tamoxen
- Valodex
- Zemide
PharmGKB Accession Id
PA451581
Type(s):
Drug
Description
Source: Drug Bank
Other Vocabularies
- ATC: Anti-estrogens (L02BA)
- UMLS: Tamoxifen (C0039286)
- RxNorm: Tamoxifen (10324)
- NDFRT: TAMOXIFEN (N0000148024)
Information pulled from DrugBank has not been reviewed by PharmGKB.
Pharmacology, Interactions, and Contraindications
Mechanism of Action
Source: Drug Bank
Pharmacology
Source: Drug Bank
Absorption, Distribution, Metabolism, Elimination & Toxicity
Biotransformation
Source: Drug Bank
Half-Life
Source: Drug Bank
Toxicity
Source: Drug Bank
Route of Elimination
Source: Drug Bank
Chemical Properties
SMILES
CC/C(=C(\C1=CC=CC=C1)/C2=CC=C(C=C2)OCCN(C)C)/C3=CC=CC=C3
Source: PubChem
InChI String
InChI=1S/C26H29NO/c1-4-25(21-11-7-5-8-12-21)26(22-13-9-6-10-14-22)23-15-17-24(18-16-23)28-20-19-27(2)3/h5-18H,4,19-20H2,1-3H3/b26-25-
Source: PubChem
PharmGKB Curated Pathways
Pathways created internally by PharmGKB based primarily on literature evidence.
-
Tamoxifen Pathway, Pharmacokinetics
Diagram showing candidate genes for tamoxifen metabolism in the liver.
Publications related to tamoxifen: 241
LinkOuts
- Web Resource:
- Wikipedia
- National Drug Code Directory:
- 0378-0144-91
- DrugBank:
- DB00675
- PDB:
- OHT
- ChEBI:
- 9396
Clinical Trials
These are trials that mention tamoxifen and are related to either pharmacogenetics or pharmacogenomics.
NURSA Datasets
No NURSA datasets available.

