The Royal Dutch Pharmacists Association - Pharmacogenetics Working Group has evaluated therapeutic dose recommendations for irinotecan based on UGT1A1 genotype (PMID:21412232). They recommend reducing the dose for *28 homozygous patients receiving more than 250 mg/m^2.
| Phenotype (Genotype) | Therapeutic Dose Recommendation | Level of Evidence | Clinical Relevance |
|---|---|---|---|
| *1/*28 | None. | Published controlled studies of moderate quality* relating to phenotyped and/or genotyped patients or healthy volunteers, and having relevant pharmacokinetic or clinical endpoints.. | Clinical effect (S): death; arrhythmia; unanticipated myelosuppression. |
| *28/*28 | Dose >250mg/m^2: reduce initial dose by 30%. Increase dose in response to neutrophil count. Dose <=250mg/m^2: no dose adjustment. | Published controlled studies of moderate quality* relating to phenotyped and/or genotyped patients or healthy volunteers, and having relevant pharmacokinetic or clinical endpoints. | Clinical effect (S): Failure of lifesaving therapy e.g. anticipated myelosuppression; prevention of breast cancer relapse; arrhythmia; neutropenia < 0.5x10^9/l; leucopenia < 1.0x10^9/l; thrombocytopenia < 25x10^9/l; life-threatening complications from diarrhea. |
- *See Methods or PMID: 18253145 for definition of "moderate" quality.
Information regarding PGx on FDA drug labels is derived from the FDA's Table of Pharmacogenomic Biomarkers in Drug Labels. Excerpts from the label and downloadable highlighted label PDFs are manually curated by PharmGKB
The FDA recommends, but does not require, genetic testing prior to initiating treatment with irinotecan.
Excerpt from the irinotecan drug label:
Individuals who are homozygous for the UGT1a1*28 allele (UGT1A1 7/7 genotype) are at increased risk for neutropenia following initiation of CAMPTOSAR treatment...When administered in combination with other agents, or as a single-agent, a reduction in the starting dose by at least one level of CAMPTOSAR should be considered for patients known to be homozygous for the UGT1A1*28 allele.
Patients homozygous for the UGT1A1*28 allele, a genetic polymorphism present in approximately 10% of the North American population that leads to reduced UGT1A1 enzyme activity, are at increased risk for neutropenia resulting from treatment with irinotecan. Individuals heterozygous for the UGT1A1 allele may be at increased risk for neutropenia. UGT1A1 catalyzes the conjugation of the highly active irinotecan metabolite SN-38 to the less-active SN-38 glucuronide.
For the complete drug label text with sections containing pharmacogenetic information highlighted, see the irinotecan drug label, updated on 5/2010 to include more studies supporting the association of UGT1A1*28 and neutropenia risk and information about laboratory testing of UGT1A1.
Nilotinib is indicated by the FDA for use in patients diagnosed with Philadelphia chromosome positive chronic myeloid leukemia.
Excerpts from the nilotinib drug label:
"Treatment of newly diagnosed adult patients with Philadelphia chromosome positive chronic myeloid leukemia (Ph+ CML) in chronic phase. The study is ongoing and further data will be required to determine long-term outcome. (1.1) Treatment of chronic phase (CP) and accelerated phase (AP) Ph+ CML in adult patients resistant to or intolerant to prior therapy that included imatinib. (1.2)"
"Mechanism of Action Nilotinib is an inhibitor of the Bcr-Abl kinase. Nilotinib binds to and stabilizes the inactive conformation of the kinase domain of Abl protein. In vitro, nilotinib inhibited Bcr-Abl mediated proliferation of murine leukemic cell lines and human cell lines derived from patients with Ph+ CML."
SUMMARY
Nilotinib is indicated for the treatment of chronic myeloid leukemia diagnosed as Philadelphia chromosome positive. The drug label includes recommended dosing guidelines for newly diagnosed individuals and for those resistant or intolerant to previous treatments.
The FDA recommends, but does not require, genetic testing for UGT1A1 variants prior to initiating or reinitiating treatment with nilotinib.
Excerpt from the nilotinib drug label:
"Tasigna can increase bilirubin levels. A pharmacogenetic analysis of 97 patients evaluated the polymorphisms of UGT1A1 and its potential association with hyperbilirubinemia during Tasigna treatment. In this study, the (TA)7/(TA)7 genotype was associated with a statistically significant increase in the risk of hyperbilirubinemia relative to the (TA)6/(TA)6 and (TA)6/(TA)7 genotypes. However, the largest increases in bilirubin were observed in the (TA)7/(TA)7 genotype (UGT1A1*28) patients (see Warnings and Precautions (5.5))."
SUMMARY
Nilotinib is an inhibitor of UGT1A1 in vitro, and individuals with the UGT1A1*28 genotype (TA)7/(TA)7 (rs8175347) are at an increased risk of hyperbilirubinemia when taking nilotinib. The drug can also inhibit ABCB1, and can inhibit or induce numerous CYP enzymes, thus may affect the pharmacokinetics of drugs taken concomitantly (as discussed in section 7.1). The label also indictates that CYP3A4 inhibitors or inducers should be avoided when taking nilotinib due to the possible effect on nilotinib pharmacokinetics and efficacy.
For the complete drug label text with sections containing this pharmacogenetic information highlighted, see the Nilotinib drug label.
*Disclaimer: The contents of this page have not been endorsed by the FDA and are the sole responsibility of PharmGKB.
PharmGKB contains no clinical annotations for this gene. To report clinical variants, click here.
A non-comprehensive list of genetic tests for specific variants, including descriptions of and links to individual tests; manually curated by PharmGKB. The information listed is provided for educational purposes only and does not constitute an endorsement of any listed test or manufacturer.
| PGx Test | Variants Assayed | Related Drugs? |
|---|---|---|
| Invader UGT1A1 Molecular Assay | UGT1A1*28 | |
| UGT1A1 (Camptosar/Irinotecan) GenotypR | UGT1A1*28 |
The table below contains information about pharmacogenomic variants on PharmGKB. Please follow the link in the "Variant" column for more information about a particular variant. Each link in the "Variant" column leads to the corresponding PharmGKB Variant Page. The Variant Page contains summary data, including PharmGKB manually curated information about variant-drug pairs based on individual PubMed publications. The PMIDs for these PubMed publications can be found on the Variant Page.
The tags in the first column of the table indicate what type of information can be found on the corresponding Variant Page.
Links in the "Drugs" column lead to PharmGKB Drug Pages.
|
Variant?
(build 132) |
Alternate Names ? | Drugs ? | Alleles ? | Function ? |
Amino Acid?
Translation |
|
|---|---|---|---|---|---|---|
| rs10929302 | UGT1A1*93, UGT1A1:-3156G>A, UGT1A1:G-3156A, c.61-9898G>A, c.856-9898G>A, c.862-9898G>A, c.868-9898G>A, g.172393G>A, g.1864G>A, g.612041G>A | A/G | Not Available | |||
| rs34993780 | T > G | Missense | Tyr487Asp | |||
| rs35350960 | UGT1A1*27, UGT1A1:Pro229Glu, c.61-6061C>A, c.686C>A, c.856-6061C>A, c.862-6061C>A, c.868-6061C>A, g.176230C>A, g.234334358C>A, g.5701C>A, g.615878C>A, p.Pro229Gln | A/C | Not Available | |||
| rs4124874 | UGT1A1*60, UGT1A1:-3263T>G, UGT1A1:-3279T>G, c.61-10021T>G, c.856-10021T>G, c.862-10021T>G, c.868-10021T>G, g.172270T>G, g.1741T>G, g.611918T>G | T/G | Not Available | |||
| rs4148323 | UGT1A1*6, UGT1A1: G71R, UGT1A1:211G>A, UGT1A1:G211A, UGT1A1:Gly71Arg, c.211G>A, c.61-6536G>A, c.856-6536G>A, c.862-6536G>A, c.868-6536G>A, g.175755G>A, g.234333883G>A, g.5226G>A, g.615403G>A, p.Gly71Arg | A/G | Not Available | |||
| rs72551344 | T > G | Not Available | Leu233Arg | |||
| rs8175347 | 7, 7-TA insertion in promoter, TA, UGT1A1*28, microsatellite, short tandem repeat | (TA)5/6/7/8 | Not Available |
Overview
| Alternate Names: | OTTHUMP00000065199; UDP glucuronosyltransferase 1A1; UDP glycosyltransferase 1 family, polypeptide A1; UDP-glucuronosyltransferase 1-1; UDP-glucuronosyltransferase 1-A; UDP-glucuronosyltransferase 1A1; UGT-1A; UGT1-01; UGT1.1; bilirubin UDP-glucuronosyltransferase 1-1; bilirubin UDP-glucuronosyltransferase isozyme 1; bilirubin-specific UDPGT isozyme 1 |
|---|---|
| Alternate Symbols:  | BILIQTL1; GNT1; HUG-BR1; UDPGT; UDPGT 1-1; UGT1; UGT1*1; UGT1A; UGT1A5 |
| Haplotypes: | UGT1A1*1L IA; UGT1A1*1a; UGT1A1*1a IA; UGT1A1*1a WILDTYPE; UGT1A1*1b; UGT1A1*1b IB; UGT1A1*1c IB; UGT1A1*1d IA; UGT1A1*1e IA; UGT1A1*1f IA; UGT1A1*1g IA; UGT1A1*1h IA; UGT1A1*1i IA; UGT1A1*1j IB; UGT1A1*1k IB; UGT1A1*6a; UGT1A1*6b; UGT1A1*6c; UGT1A1*6d; UGT1A1*28b; UGT1A1*28c; UGT1A1*28d; UGT1A1*36b; UGT1A1*37b; UGT1A1*364L IA; UGT1A1*533P IB; UGT1A1*60a; UGT1A1*60b; UGT1A1*60c; UGT1A1*I; UGT1A1*II; UGT1A1*III; UGT1A1*IV; UGT1A1*IX; UGT1A1*V; UGT1A1*VI; UGT1A1*VII; UGT1A1*VIII; UGT1A1*X |
| PharmGKB Accession Id: | PA420 |
Details
| Cytogenetic Location: | chr2 : q37.1 - q37.1 |
|---|---|
| GP mRNA Boundary†: | chr2 : 234668919 - 234681945 |
| GP Gene Boundary†: | chr2 : 234658919 - 234684945 |
| Strand: | plus |
| Product Name: | UDP glucuronosyltransferase 1A1, UDP glycosyltransferase 1 family, polypeptide A1, UDP glycosyltransferase 1 family, polypeptide A1 precursor, bilirubin UDP-glucuronosyltransferase 1-1, bilirubin UDP-glucuronosyltransferase isozyme 1 |
All alleles are displayed on the positive chromosomal strand.
| Haplotype | rs10929302 | rs13404099 | rs34946978 | rs35350960 | rs4124874 | rs4148323 | rs8175347 | rs873478 | rs887829 |
|---|---|---|---|---|---|---|---|---|---|
| UGT1A1*1L IA | G | C | C | C | T | G | 6 | G | C |
| UGT1A1*1a | G | C | C | C | T | G | 6 | G | C |
| UGT1A1*1a IA | G | C | C | C | T | G | 6 | G | C |
| UGT1A1*1a WILDTYPE | G | C | C | C | G | 6 | G | C | |
| UGT1A1*1b | G | C | C | C | T | G | 6 | G | C |
| UGT1A1*1b IB | G | C | C | C | T | G | 6 | G | C |
| UGT1A1*1c IB | G | C | C | C | T | G | 6 | G | C |
| UGT1A1*1d IA | G | C | C | C | T | G | 6 | G | C |
| UGT1A1*1e IA | G | C | C | C | T | G | 6 | G | C |
| UGT1A1*1f IA | G | C | C | C | T | G | 6 | G | C |
| UGT1A1*1g IA | G | C | C | C | T | G | 6 | G | C |
| UGT1A1*1h IA | G | C | C | C | T | G | 6 | G | C |
| UGT1A1*1i IA | G | C | C | C | T | G | 6 | G | C |
| UGT1A1*1j IB | G | C | C | C | T | G | 6 | G | C |
| UGT1A1*1k IB | G | C | C | C | T | G | 6 | G | C |
| UGT1A1*6a | G | C | C | C | T | A | 6 | G | C |
| UGT1A1*6b | G | C | C | C | T | A | 6 | G | C |
| UGT1A1*6c | G | C | C | C | T | A | 6 | G | C |
| UGT1A1*6d | G | C | C | C | G | A | 6 | G | C |
| UGT1A1*28b | A | C | C | C | G | G | 7 | G | T |
| UGT1A1*28c | A | C | C | A | G | G | 7 | G | T |
| UGT1A1*28d | G | C | C | C | T | G | 7 | G | T |
| UGT1A1*36b | G | C | C | C | G | G | 5 | G | C |
| UGT1A1*37b | G | C | C | C | G | G | 8 | G | C |
| UGT1A1*364L IA | G | C | T | C | T | G | 6 | G | C |
| UGT1A1*533P IB | G | C | C | C | T | G | 6 | G | C |
| UGT1A1*60a | G | C | C | C | G | G | 6 | G | C |
| UGT1A1*60b | G | C | C | C | G | G | 6 | C | C |
| UGT1A1*60c | G | G | C | C | G | G | 6 | C | C |
| UGT1A1*I | G | C | C | C | T | G | 6 | G | C |
| UGT1A1*II | G | C | C | C | G | G | 6 | G | C |
| UGT1A1*III | G | C | C | C | G | G | 6 | G | C |
| UGT1A1*IV | G | C | C | C | G | G | 6 | G | C |
| UGT1A1*IX | G | C | C | C | G | G | 8 | G | C |
| UGT1A1*V | A | C | C | C | G | G | 6 | G | C |
| UGT1A1*VI | A | C | C | C | G | G | 7 | G | C |
| UGT1A1*VII | G | C | C | C | G | G | 7 | G | C |
| UGT1A1*VIII | A | G | C | C | G | G | 7 | G | C |
| UGT1A1*X | G | C | C | C | G | G | 5 | G | C |
PharmGKB Curated Pathways
Pathways created internally by PharmGKB based primarily on literature evidence.
-
Atorvastatin/Lovastatin/Simvastatin Pathway, Pharmacokinetics
Drug-specific representation of the candidate genes involved in transport, metabolism and clearance.
-
Codeine and Morphine Pathway, Pharmacokinetics
Representation of the candidate genes involved in metabolism of codeine and morphine.
-
Erlotinib Pathway, Pharmacokinetics
Model human liver cell showing genes involved in the transportation and metabolism of Erlotinib.
-
Estrogen Metabolism Pathway
Estrogen metabolism in the liver.
-
Etoposide Pathway
Etoposide cellular disposition and effects.
-
Fluvastatin Pathway, Pharmacokinetics
Drug-specific representation of the candidate genes involved in transport, metabolism and clearance.
-
Irinotecan Pathway, Pharmacodynamics
Model non-tissue specific cancer cell displaying genes which may be involved in the irinotecan pathway.
-
Irinotecan Pathway, Pharmacokinetics
Model human liver cell showing blood, bile and intestinal compartments, indicating tissue specific involvement of genes in the irinotecan pathway.
-
Losartan Pathway, Pharmacokinetics
Representation of the candidate genes involved in the metabolism of losartan.
-
Phenytoin Pathway, Pharmacokinetics
Genes involved in the metabolism of phenytoin in the human liver cell.
-
Statin Pathway - Generalized, Pharmacokinetics
Representation of the superset of all genes involved in the transport, metabolism and clearance of statin class drugs.
External Pathways
Links to non-PharmGKB pathways.
PharmGKB contains no links to external pathways for this gene. To report a pathway, click here.
Datasets
- Genetic determinants of UGT1A1 inducibility by phenobarbital in hepatocytes
- Irinotecan Clinical Data
- Pharmacogenetic Risk Factors for Osteonecrosis of the Hip Among Children With Leukemia
- Pharmacokinetics of etoposide, catechol metabolite
- Pharmacokinetics of irinotecan in cancer patients
- Protein expression of genes in the irinotecan pathway
- RNA expression in metabolite and transport genes
- HNF1 alpha mRNA expression in Human Liver
- In vitro glucuronidation of thyroxine in human livers
- Pharmacogenetic Pathway Analysis of Irinotecan
- Searching for Tissue-Specific Expression Pattern-Linked Nucleotides of UGT1A Isoforms
Downloads
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LinkOuts
- UniProtKB:
- UD11_HUMAN (P22309)
- Q5DT03_HUMAN (Q5DT03)
- Ensembl:
- ENSG00000241635
- GenAtlas:
- UGT1A1
- GeneCard:
- GC02P234668 (54658)
- SOURCE:
- UGT1A1
- MutDB:
- UGT1A1
Common Searches
Non-Curated Publications
A list of non-curated publications that mention this gene is available.











