Gene:
PLTP
phospholipid transfer protein

PharmGKB contains no dosing guidelines for this gene. To report known dosing guidelines, or if you are interested in developing guidelines, click here.

PharmGKB contains no drug labels with pharmacogenomic information for this gene. To report a drug label with PGx, click here.

PharmGKB contains no clinical annotations for this gene. To report clinical variants, click here.

PharmGKB contains no genetic tests for this gene. To report genetic tests, click here.

Overview

Alternate Names:  OTTHUMP00000031678; OTTHUMP00000031679; OTTHUMP00000214866; lipid transfer protein II
Alternate Symbols:  HDLCQ9
PharmGKB Accession Id: PA273

Details

Cytogenetic Location: chr20 : q13.12 - q13.12
GP mRNA Boundary: chr20 : 44527397 - 44540786
GP Gene Boundary: chr20 : 44524397 - 44550786
Strand: minus
Product Name: No data available
The mRNA boundaries are calculated using the gene's default feature set from NCBI, mapped onto the UCSC Golden Path. PharmGKB sets gene boundaries by expanding the mRNA boundaries by no less than 10,000 bases upstream (5') and 3,000 bases downstream (3') to allow for potential regulatory regions.

PharmGKB Curated Pathways

Pathways created internally by PharmGKB based primarily on literature evidence.

  1. Statin Pathway, Pharmacodynamics
    Genes involved in mediating statin effects on hepatic cholesterol metabolism and consequent effects on plasma lipoprotein transport.

External Pathways

Links to non-PharmGKB pathways.

PharmGKB contains no links to external pathways for this gene. To report a pathway, click here.

Curated Information ?

Evidence Gene
No Dosing Guideline available No Drug Label available No Clinical Annotation available No Variant Annotation available No VIP available PW
APOA1
No Dosing Guideline available No Drug Label available No Clinical Annotation available No Variant Annotation available No VIP available PW
APOA4
No related diseases are available

Publications related to PLTP: 2

No Dosing Guideline available No Drug Label available No Clinical Annotation available No Variant Annotation available No VIP available No VIP available
Common single-nucleotide polymorphisms act in concert to affect plasma levels of high-density lipoprotein cholesterol. American journal of human genetics. 2007. Spirin Victor, et al. [Article:17952847@PubMed]
No Dosing Guideline available No Drug Label available No Clinical Annotation available No Variant Annotation available No VIP available No VIP available
Classification, subtype discovery, and prediction of outcome in pediatric acute lymphoblastic leukemia by gene expression profiling. Cancer cell. 2002. Yeoh Eng-Juh, et al. [Article:12086872@PubMed]

LinkOuts

Entrez Gene:
5360
OMIM:
172425
UCSC Genome Browser:
NM_006227
RefSeq RNA:
NM_006227
NM_182676
RefSeq Protein:
NP_006218
NP_872617
RefSeq DNA:
AC_000063
AC_000152
NC_000020
NG_012115
NT_011362
NW_001838666
NW_927339
UniProtKB:
PLTP_HUMAN (P55058)
Ensembl:
ENSG00000100979
GenAtlas:
PLTP
GeneCard:
GC20M044528 (5360)
MutDB:
PLTP
ALFRED:
LO062909A
HuGE:
PLTP
Comparative Toxicogenomics Database:
5360
ModBase:
P55058
HumanCyc Gene:
HS02173
HGNC:
9093

Common Searches

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