Gene:
ADH1C
alcohol dehydrogenase 1C (class I), gamma polypeptide

PharmGKB contains no dosing guidelines for this gene. To report known dosing guidelines, or if you are interested in developing guidelines, click here.

PharmGKB contains no drug labels with pharmacogenomic information for this gene. To report a drug label with PGx, click here.

PharmGKB contains no clinical annotations for this gene. To report clinical variants, click here.

PharmGKB contains no genetic tests for this gene. To report genetic tests, click here.

The table below contains information about pharmacogenomic variants on PharmGKB. Please follow the link in the "Variant" column for more information about a particular variant. Each link in the "Variant" column leads to the corresponding PharmGKB Variant Page. The Variant Page contains summary data, including PharmGKB manually curated information about variant-drug pairs based on individual PubMed publications. The PMIDs for these PubMed publications can be found on the Variant Page.

The tags in the first column of the table indicate what type of information can be found on the corresponding Variant Page.

Links in the "Drugs" column lead to PharmGKB Drug Pages.

Variant?
(build 132)
Alternate Names ? Drugs ? Alleles ? Function ? Amino Acid?
Translation
No VIP available No Clinical Annotations available VA
rs1662060 T/C Not Available
No VIP available No Clinical Annotations available VA
rs283411 C/A Not Available
No VIP available No Clinical Annotations available VA
rs283416 G/A Not Available
VIP No Clinical Annotations available No Variant Annotations available
rs698 ADH1C*2, c.1048A>G, g.18129A>G, g.24808510T>A, g.24808510T>C, p.Ile350Val T > C Missense Ile350Val
Alleles, Functions, and Amino Acid Translations are all sourced from dbSNP build 132

Overview

Alternate Names:  ADH, gamma subunit; OTTHUMP00000220209; alcohol dehydrogenase 1C; alcohol dehydrogenase 1C, gamma polypeptide; alcohol dehydrogenase 3; alcohol dehydrogenase 3 (class I), gamma polypeptide; alcohol dehydrogenase subunit gamma; aldehyde reductase
Alternate Symbols:  ADH3
PharmGKB Accession Id: PA24572

Details

Cytogenetic Location: chr4 : q23 - q23
GP mRNA Boundary: chr4 : 100257649 - 100273917
GP Gene Boundary: chr4 : 100254649 - 100283917
Strand: minus
Product Name: ADH, gamma subunit, alcohol dehydrogenase 3, alcohol dehydrogenase 3 (class I), gamma polypeptide, aldehyde reductase, class I alcohol dehydrogenase, gamma subunit
The mRNA boundaries are calculated using the gene's default feature set from NCBI, mapped onto the UCSC Golden Path. PharmGKB sets gene boundaries by expanding the mRNA boundaries by no less than 10,000 bases upstream (5') and 3,000 bases downstream (3') to allow for potential regulatory regions.

PharmGKB Curated Pathways

Pathways created internally by PharmGKB based primarily on literature evidence.

  1. Cyclophosphamide Pathway, Pharmacodynamics
    Model non-tissue-specific cancer cell displaying genes which may be involved in the cyclophosphamide pathway.

External Pathways

Links to non-PharmGKB pathways.

  1. Ethanol is oxidized by NAD+ to form acetaldehyde, NADH, and H+ - (Reactome via Pathway Interaction Database)

No related genes are available.

Non-Curated Information ?

A list of non-curated publications that mention this gene along with other genes is available.

Curated Information ?

Drug Class Relationship Evidence
xenobiotics
  •   
  •   
Publications
Drug Relationship Evidence
ethanol
  • PD
  •   
Publications, Variants

Non-Curated Information ?

A list of non-curated publications that mention this gene along with other drugs is available.

Curated Information ?

Disease Relationship Evidence
Alcohol-Related Disorders
  •   
  •   
Publications
Alcoholism
  • PD
  •   
Publications
Liver Diseases, Alcoholic
  •   
  •   
Publications
Lung Neoplasms
  •   
  •   
Publications

Non-Curated Information ?

A list of non-curated publications that mention this gene along with other diseases is available.

Downloads

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LinkOuts

Entrez Gene:
126
OMIM:
103730
168600
UCSC Genome Browser:
NM_000669
RefSeq RNA:
NM_000669
RefSeq Protein:
NP_000660
MutDB:
ADH1C
ALFRED:
LO000228M
HuGE:
ADH1C
Comparative Toxicogenomics Database:
126
ModBase:
P00326
HGNC:
251

Common Searches

Non-Curated Publications

A list of non-curated publications that mention this gene is available.

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