In silico and in vitro pharmacogenetic analysis in mice
by Guo Yingying, Lu Peng, Farrell Erin, Zhang Xun, Weller Paul, Monshouwer Mario, Wang Jianmei, Liao Guochun, Zhang Zhaomei, Hu Steven, Allard John, Shafer Steve, Usuka Jonathan, Peltz Gary in Proc Natl Acad Sci U S A (2007).
PMID: 17978195

Relationships

Gene/Drug/Disease Relationship
UGT1A1, irinotecan, testosterone, Colorectal Neoplasms, Diarrhea

Categories of Pharmacogenetic Knowledge?

PD    Pharmacodynamics and Drug Response
PK    Pharmacokinetics
FA    Molecular and Cellular Functional Assays
GN    Genotype

Abstract

Combining the experimental efficiency of a murine hepatic in vitro drug biotransformation system with in silico genetic analysis produces a model system that can rapidly analyze interindividual differences in drug metabolism. This model system was tested by using two clinically important drugs, testosterone and irinotecan, whose metabolism was previously well characterized. The metabolites produced after these drugs were incubated with hepatic in vitro biotransformation systems prepared from the 15 inbred mouse strains were measured. Strain-specific differences in the rate of 16alpha-hydroxytestosterone generation and irinotecan glucuronidation correlated with the pattern of genetic variation within Cyp2b9 and Ugt1a loci, respectively. These computational predictions were experimentally confirmed using expressed recombinant enzymes. The genetic changes affecting irinotecan metabolism in mice mirrored those in humans that are known to affect the pharmacokinetics and incidence of adverse responses to this medication.

Keywords

16-hydroxytestosterone, CYP2B9, adverse events, in silico, in vitro, inbred mouse strains, irinotecan glucuronidation

Publication Type

  • Primary experiment paper
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